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CRLF1 cytokine receptor like factor 1 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103534972, updated on 3-Aug-2024

Summary

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Gene symbol
CRLF1
Gene description
cytokine receptor like factor 1
Locus tag
N300_07789
See related
EnsemblRapid:ENSCAAG00010009756
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 28
Exon count:
8
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 28 NC_044273.1 (3655968..3666720)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007621507.1 (1112969..1121999)

Chromosome 28 - NC_044273.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 26 Neighboring gene transmembrane protein 59 like Neighboring gene required for excision 1-B domain containing Neighboring gene ubiquitin A-52 residue ribosomal protein fusion product 1 Neighboring gene KxDL motif containing 1 Neighboring gene FKBP prolyl isomerase 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine receptor-like factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044273.1 Reference bCalAnn1_v1.p

    Range
    3655968..3666720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030466286.1 → XP_030322146.1  cytokine receptor-like factor 1 isoform X2

    Conserved Domains (3) summary
    cd00063
    Location:225 → 327
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:31 → 93
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 217
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

  2. XM_030466285.1 → XP_030322145.1  cytokine receptor-like factor 1 isoform X1

    Related
    ENSCAAP00010013410.1, ENSCAAT00010014205.1
    Conserved Domains (3) summary
    cd00063
    Location:225 → 327
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam06328
    Location:31 → 93
    Lep_receptor_Ig; Ig-like C2-type domain
    cl21522
    Location:122 → 217
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
Nucleotide Protein
Heading Accession and Version

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