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ush1g USH1 protein network component sans [ Poecilia reticulata (guppy) ]

Gene ID: 103481598, updated on 9-Nov-2023

Summary

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Gene symbol
ush1g
Gene description
USH1 protein network component sans
See related
Ensembl:ENSPREG00000008338
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: LG19
Exon count:
4
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG19 NC_024349.1 (13949822..13958008, complement)

Linkage Group LG19 - NC_024349.1Genomic Context describing neighboring genes Neighboring gene trans-golgi network vesicle protein 23 homolog B (S. cerevisiae) Neighboring gene tripartite motif containing 16 Neighboring gene fatty acid desaturase 6 Neighboring gene HID1 domain containing b Neighboring gene plasminogen activator, urokinase b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024349.1 Chromosome LG19 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Usher syndrome type-1G protein
Names
Usher syndrome 1G (autosomal recessive)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024349.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    13949822..13958008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008437181.2 → XP_008435403.1  Usher syndrome type-1G protein

    UniProtKB/TrEMBL
    A0A3P9NRU2
    Related
    ENSPREP00000012299.1, ENSPRET00000012433.1
    Conserved Domains (5) summary
    smart00454
    Location:402 → 460
    SAM; Sterile alpha motif
    cd00204
    Location:6 → 117
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:6 → 91
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:31 → 62
    ANK; ANK repeat [structural motif]
    cl15755
    Location:404 → 469
    SAM_superfamily; SAM (Sterile alpha motif )
Nucleotide Protein
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