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pou3f2b POU class 3 homeobox 2b [ Poecilia reticulata (guppy) ]

Gene ID: 103478222, updated on 11-Mar-2024

Summary

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Gene symbol
pou3f2b
Gene description
POU class 3 homeobox 2b
See related
Ensembl:ENSPREG00000015810
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
pou3f2
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG16
Exon count:
1
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG16 NC_024346.1 (27848556..27850243, complement)

Linkage Group LG16 - NC_024346.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q3 methyltransferase Neighboring gene failed axon connections homolog, metaxin like GST domain containing b Neighboring gene F-box and leucine-rich repeat protein 4 Neighboring gene proprotein convertase subtilisin/kexin type 4-like Neighboring gene MMS22-like, DNA repair protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024346.1 Chromosome LG16 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
POU domain, class 3, transcription factor 2
Names
POU class 3 homeobox 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024346.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    27848556..27850243 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008431868.2 → XP_008430090.1  POU domain, class 3, transcription factor 2

    UniProtKB/TrEMBL
    A0A3P9PNT3
    Related
    ENSPREP00000023425.1, ENSPRET00000023665.1
    Conserved Domains (2) summary
    smart00352
    Location:250 → 324
    POU; Found in Pit-Oct-Unc transcription factors
    pfam00046
    Location:345 → 398
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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