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ap3b1a adaptor related protein complex 3 subunit beta 1a [ Poecilia reticulata (guppy) ]

Gene ID: 103473301, updated on 11-Mar-2024

Summary

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Gene symbol
ap3b1a
Gene description
adaptor related protein complex 3 subunit beta 1a
See related
Ensembl:ENSPREG00000018892
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
ap3b1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG12
Exon count:
29
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG12 NC_024342.1 (4634883..4703578, complement)

Linkage Group LG12 - NC_024342.1Genomic Context describing neighboring genes Neighboring gene orthopedia homeobox a Neighboring gene tubulin cofactor a Neighboring gene uncharacterized LOC103473302 Neighboring gene secretory carrier membrane protein 1 Neighboring gene LHFPL tetraspan subfamily member 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024342.1 Chromosome LG12 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-1
Names
adaptor related protein complex 3 beta 1 subunit
adaptor related protein complex 3 subunit beta 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024342.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    4634883..4703578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008423416.2 → XP_008421638.1  AP-3 complex subunit beta-1 isoform X4

    UniProtKB/TrEMBL
    A0A3P9Q1T4, A0A3P9Q2D1
    Related
    ENSPREP00000028003.1, ENSPRET00000028310.1
    Conserved Domains (4) summary
    pfam01602
    Location:47 → 585
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:129 → 252
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:825 → 967
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:117 → 145
    HEAT; HEAT repeat [structural motif]

  2. XM_008423413.1 → XP_008421635.1  AP-3 complex subunit beta-1 isoform X2

    UniProtKB/TrEMBL
    A0A3P9Q1T4
    Conserved Domains (4) summary
    pfam01602
    Location:47 → 585
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:129 → 252
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:839 → 981
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:117 → 145
    HEAT; HEAT repeat [structural motif]

  3. XM_008423412.2 → XP_008421634.1  AP-3 complex subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3P9Q1T4
    Conserved Domains (4) summary
    pfam01602
    Location:60 → 598
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:142 → 265
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:852 → 994
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:130 → 158
    HEAT; HEAT repeat [structural motif]

  4. XM_008423414.2 → XP_008421636.1  AP-3 complex subunit beta-1 isoform X3

    UniProtKB/TrEMBL
    A0A3P9Q1T4
    Conserved Domains (4) summary
    pfam01602
    Location:60 → 598
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:142 → 265
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:838 → 980
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:130 → 158
    HEAT; HEAT repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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