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dnajc2 DnaJ (Hsp40) homolog, subfamily C, member 2 [ Poecilia reticulata (guppy) ]

Gene ID: 103459594, updated on 11-Mar-2024

Summary

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Gene symbol
dnajc2
Gene description
DnaJ (Hsp40) homolog, subfamily C, member 2
See related
Ensembl:ENSPREG00000013574
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG23
Exon count:
16
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG23 NC_024353.1 (13952214..13960707)

Linkage Group LG23 - NC_024353.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 5 Neighboring gene proteasome 26S subunit, ATPase 2 Neighboring gene peptidase, mitochondrial processing subunit beta Neighboring gene phosphorylated adaptor for RNA export Neighboring gene potassium voltage-gated channel, Shaw-related subfamily, member 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024353.1 Chromosome LG23 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' cotranslational protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 2
Names
DnaJ heat shock protein family (Hsp40) member C2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024353.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    13952214..13960707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008401285.2 → XP_008399507.1  dnaJ homolog subfamily C member 2

    UniProtKB/TrEMBL
    A0A3P9PEG2
    Related
    ENSPREP00000020073.1, ENSPRET00000020285.1
    Conserved Domains (5) summary
    smart00717
    Location:551 → 600
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    COG5269
    Location:72 → 412
    ZUO1; Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
    cd00167
    Location:551 → 598
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam00226
    Location:85 → 155
    DnaJ; DnaJ domain
    pfam16717
    Location:346 → 416
    RAC_head; Ribosome-associated complex head domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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