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atp10d ATPase phospholipid transporting 10D [ Poecilia reticulata (guppy) ]

Gene ID: 103459068, updated on 11-Mar-2024

Summary

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Gene symbol
atp10d
Gene description
ATPase phospholipid transporting 10D
See related
Ensembl:ENSPREG00000011438
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG22
Exon count:
21
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG22 NC_024352.1 (19728529..19745054)

Linkage Group LG22 - NC_024352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108165844 Neighboring gene gamma-aminobutyric acid type A receptor subunit beta1 Neighboring gene COMM domain containing 8 Neighboring gene dual adaptor of phosphotyrosine and 3-phosphoinositides Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024352.1 Chromosome LG22 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATPase-coupled intramembrane lipid transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable phospholipid-transporting ATPase VD
Names
ATPase phospholipid transporting 10D (putative)
ATPase, class V, type 10D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024352.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    19728529..19745054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008400298.2 → XP_008398520.1  probable phospholipid-transporting ATPase VD

    UniProtKB/TrEMBL
    A0A3P9P554
    Related
    ENSPREP00000016956.1, ENSPRET00000017136.1
    Conserved Domains (6) summary
    COG0474
    Location:15 → 295
    MgtA; Magnesium-transporting ATPase (P-type) [Inorganic ion transport and metabolism]
    TIGR01484
    Location:745 → 907
    HAD-SF-IIB; HAD-superfamily hydrolase, subfamily IIB
    pfam13246
    Location:558 → 652
    Cation_ATPase; Cation transport ATPase (P-type)
    pfam16212
    Location:916 → 1159
    PhoLip_ATPase_C; Phospholipid-translocating P-type ATPase C-terminal
    cl00297
    Location:715 → 778
    R3H; R3H domain. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. R3H domains are found in proteins together with ATPase domains, SF1 helicase domains, SF2 DEAH helicase domains, Cys-rich ...
    cl21460
    Location:870 → 933
    HAD_like; Haloacid Dehalogenase-like Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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