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abhd4 abhydrolase domain containing 4, N-acyl phospholipase B [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103396207, updated on 11-Mar-2024

Summary

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Gene symbol
abhd4
Gene description
abhydrolase domain containing 4, N-acyl phospholipase B
See related
Ensembl:ENSCSEG00000018573
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 20 NC_024326.1 (5619763..5624159, complement)

Chromosome 20 - NC_024326.1Genomic Context describing neighboring genes Neighboring gene RAS (RAD and GEM)-like GTP binding 2 Neighboring gene transglutaminase 1 like 1 Neighboring gene NOP9 nucleolar protein Neighboring gene defender against cell death 1 Neighboring gene polymeric immunoglobulin receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024326.1 Chromosome 20 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein ABHD4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024326.1 Reference Cse_v1.0 Primary Assembly

    Range
    5619763..5624159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008334213.2 → XP_008332435.1  protein ABHD4

    See identical proteins and their annotated locations for XP_008332435.1

    UniProtKB/TrEMBL
    A0A3P8WR84
    Related
    ENSCSEP00000028997.1, ENSCSET00000029394.1
    Conserved Domains (3) summary
    COG0596
    Location:83 → 367
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    pfam12695
    Location:85 → 197
    Abhydrolase_5; Alpha/beta hydrolase family
    cl00222
    Location:214 → 274
    lysozyme_like; lysozyme_like domain. This contains several members including Soluble Lytic Transglycosylases (SLT), Goose Egg-White Lysozymes (GEWL), Hen Egg-White Lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, and chitosanases. ...
Nucleotide Protein
Heading Accession and Version

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