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dis3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103373832, updated on 11-Mar-2024

Summary

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Gene symbol
dis3
Gene description
DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
See related
Ensembl:ENSSPAG00000019530
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579809.1 (59526..67467)

NW_007579809.1Genomic Context describing neighboring genes Neighboring gene Kruppel-like factor 5a Neighboring gene progesterone immunomodulatory binding factor 1 Neighboring gene bora aurora kinase A activator Neighboring gene mitotic spindle organizing protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579809 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex exonuclease RRP44
Names
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579809.1 Reference Stegastes_partitus-1.0.2

    Range
    59526..67467
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008303839.1 → XP_008302061.1  exosome complex exonuclease RRP44

    UniProtKB/TrEMBL
    A0A3B5AX49, A0A3B5AY71
    Related
    ENSSPAP00000025905.1, ENSSPAT00000026330.1
    Conserved Domains (3) summary
    cd09862
    Location:9 → 195
    PIN_Rrp44; PIN domain of yeast exosome subunit Rrp44 endoribonuclease and other eukaryotic homologs
    COG0557
    Location:188 → 922
    VacB; Exoribonuclease R [Transcription]
    pfam00773
    Location:465 → 793
    RNB; RNB domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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