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ankef1a ankyrin repeat and EF-hand domain containing 1a [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103372346, updated on 11-Mar-2024

Summary

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Gene symbol
ankef1a
Gene description
ankyrin repeat and EF-hand domain containing 1a
See related
Ensembl:ENSSPAG00000010413
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
ankef1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579470.1 (50884..62517)

NW_007579470.1Genomic Context describing neighboring genes Neighboring gene elastin microfibril interfacer 1a Neighboring gene synaptosome associated protein 25a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579470 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and EF-hand domain-containing protein 1
Names
ankyrin repeat and EF-hand domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579470.1 Reference Stegastes_partitus-1.0.2

    Range
    50884..62517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008301965.1 → XP_008300187.1  ankyrin repeat and EF-hand domain-containing protein 1

    UniProtKB/TrEMBL
    A0A3B5A7P6, A0A9Y4TYI4
    Related
    ENSSPAP00000013904.1, ENSSPAT00000014138.1
    Conserved Domains (4) summary
    cd00204
    Location:521 → 644
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:531 → 622
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:529 → 557
    ANK; ANK repeat [structural motif]
    cl08302
    Location:342 → 400
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
Heading Accession and Version

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