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crebrf creb3 regulatory factor [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103369968, updated on 11-Mar-2024

Summary

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Gene symbol
crebrf
Gene description
creb3 regulatory factor
See related
Ensembl:ENSSPAG00000000649
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579085.1 (126754..159223)

NW_007579085.1Genomic Context describing neighboring genes Neighboring gene transcription elongation regulator 1 Neighboring gene uncharacterized LOC103369964 Neighboring gene prenylcysteine oxidase 1 like Neighboring gene uncharacterized LOC103369967 Neighboring gene stanniocalcin-2-like Neighboring gene BCL2 interacting protein 1b Neighboring gene HIV-1 Tat specific factor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579085 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to unfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CREB3 regulatory factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579085.1 Reference Stegastes_partitus-1.0.2

    Range
    126754..159223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008298838.1 → XP_008297060.1  CREB3 regulatory factor isoform X2

    UniProtKB/TrEMBL
    A0A3B4ZGU9
    Related
    ENSSPAP00000000827.1, ENSSPAT00000000839.1
    Conserved Domains (1) summary
    cd14809
    Location:613 → 651
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains

  2. XM_008298837.1 → XP_008297059.1  CREB3 regulatory factor isoform X1

    UniProtKB/TrEMBL
    A0A9Y4NGZ1
    Conserved Domains (1) summary
    cd14809
    Location:631 → 669
    bZIP_AUREO-like; Basic leucine zipper (bZIP) domain of blue light (BL) receptor aureochrome (AUREO) and similar bZIP domains
Nucleotide Protein
Heading Accession and Version

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