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znf628 zinc finger protein 628 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103367665, updated on 12-Sep-2024

Summary

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Gene symbol
znf628
Gene description
zinc finger protein 628
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578805.1 (156636..169058, complement)

NW_007578805.1Genomic Context describing neighboring genes Neighboring gene activation-induced cytidine deaminase Neighboring gene N-acetyltransferase 14 (GCN5-related, putative) Neighboring gene interleukin 11a Neighboring gene Ras interacting protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578805 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 628

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578805.1 Reference Stegastes_partitus-1.0.2

    Range
    156636..169058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008295769.1 → XP_008293991.1  zinc finger protein 628

    UniProtKB/TrEMBL
    A0A9Y4KPL3
    Conserved Domains (5) summary
    COG5048
    Location:188 → 681
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:191 → 211
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:217 → 239
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:649 → 673
    zf-H2C2_2; Zinc-finger double domain
    cl19880
    Location:49 → 106
    ROS_MUCR; ROS/MUCR transcriptional regulator protein
Nucleotide Protein
Heading Accession and Version

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