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nkx6.2 NK6 homeobox 2 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103363758, updated on 11-Mar-2024

Summary

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Gene symbol
nkx6.2
Gene description
NK6 homeobox 2
See related
Ensembl:ENSSPAG00000021549
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
nkx6-2
Orthologs
human zebrafish all
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Genomic context

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See nkx6.2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578419.1 (320090..321738, complement)

NW_007578419.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 27 Neighboring gene PWWP domain containing 2B Neighboring gene inositol polyphosphate-5-phosphatase A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578419 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Nkx-6.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578419.1 Reference Stegastes_partitus-1.0.2

    Range
    320090..321738 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008290643.1 → XP_008288865.1  homeobox protein Nkx-6.2

    UniProtKB/TrEMBL
    A0A3B5BKU4
    Related
    ENSSPAP00000028627.1, ENSSPAT00000029091.1
    Conserved Domains (1) summary
    pfam00046
    Location:159 → 212
    Homeobox; Homeobox domain
Nucleotide Protein
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