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rrs1 ribosome biogenesis regulator 1 homolog [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103362152, updated on 11-Mar-2024

Summary

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Gene symbol
rrs1
Gene description
ribosome biogenesis regulator 1 homolog
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578289.1 (338977..340359)

NW_007578289.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 55b Neighboring gene corticotropin releasing hormone b Neighboring gene vexin Neighboring gene v-myb avian myeloblastosis viral oncogene homolog-like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578289 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal large subunit export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribosome biogenesis regulatory protein homolog
Names
ribosome biogenesis regulator homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578289.1 Reference Stegastes_partitus-1.0.2

    Range
    338977..340359
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008288434.1 → XP_008286656.1  ribosome biogenesis regulatory protein homolog

    UniProtKB/TrEMBL
    A0A9Y4KCV7
    Conserved Domains (1) summary
    pfam04939
    Location:32 → 193
    RRS1; Ribosome biogenesis regulatory protein (RRS1)
Nucleotide Protein
Heading Accession and Version

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