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trmt61a tRNA methyltransferase 61A [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103354743, updated on 11-Mar-2024

Summary

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Gene symbol
trmt61a
Gene description
tRNA methyltransferase 61A
See related
Ensembl:ENSSPAG00000017259
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577850.1 (350952..374640, complement)

NW_007577850.1Genomic Context describing neighboring genes Neighboring gene apoptogenic 1, mitochondrial Neighboring gene BCL2 associated athanogene 5 Neighboring gene creatine kinase, brain a Neighboring gene MAP/microtubule affinity-regulating kinase 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577850 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tRNA (m1A) methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577850.1 Reference Stegastes_partitus-1.0.2

    Range
    350952..374640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008278231.1 → XP_008276453.1  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X2

    UniProtKB/TrEMBL
    A0A9Y4JL53
    Conserved Domains (2) summary
    COG2519
    Location:10 → 289
    Gcd14; tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]
    pfam08704
    Location:64 → 288
    GCD14; tRNA methyltransferase complex GCD14 subunit

  2. XM_008278230.1 → XP_008276452.1  tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A isoform X1

    UniProtKB/TrEMBL
    A0A3B5AMZ9
    Related
    ENSSPAP00000022853.1, ENSSPAT00000023219.1
    Conserved Domains (2) summary
    COG2519
    Location:10 → 290
    Gcd14; tRNA A58 N-methylase Trm61 [Translation, ribosomal structure and biogenesis]
    pfam08704
    Location:64 → 289
    GCD14; tRNA methyltransferase complex GCD14 subunit
Nucleotide Protein
Heading Accession and Version

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