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RBM45 RNA binding motif protein 45 [ Eptesicus fuscus (big brown bat) ]

Gene ID: 103283281, updated on 30-Mar-2024

Summary

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Gene symbol
RBM45
Gene description
RNA binding motif protein 45
Gene type
protein coding
RefSeq status
MODEL
Organism
Eptesicus fuscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Eptesicus
Orthologs
human mouse all
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Genomic context

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See RBM45 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current DD_ASM_mEF_20220401 (GCF_027574615.1) 11 NC_072483.1 (53471083..53487879)
101 previous assembly EptFus1.0 (GCF_000308155.1) Unplaced Scaffold NW_007370658.1 (10036212..10053666, complement)

Chromosome 11 - NC_072483.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 30B Neighboring gene phosphodiesterase 11A Neighboring gene oxysterol binding protein like 6 Neighboring gene protein activator of interferon induced protein kinase EIF2AK2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein 45

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027574615.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_ASM_mEF_20220401

Genomic

  1. NC_072483.1 Reference DD_ASM_mEF_20220401

    Range
    53471083..53487879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028140898.2 → XP_027996699.1  RNA-binding protein 45 isoform X1

    Conserved Domains (4) summary
    cd12366
    Location:23 → 104
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:120 → 193
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:246 → 318
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:392 → 459
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins

  2. XM_028140897.2 → XP_027996698.1  RNA-binding protein 45 isoform X1

    Conserved Domains (4) summary
    cd12366
    Location:23 → 104
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:120 → 193
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:246 → 318
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:392 → 459
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins

  3. XM_054723164.1 → XP_054579139.1  RNA-binding protein 45 isoform X4

  4. XM_008138519.3 → XP_008136741.1  RNA-binding protein 45 isoform X2

    Conserved Domains (4) summary
    cd12366
    Location:23 → 104
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:120 → 193
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:246 → 318
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:391 → 458
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins

  5. XM_028140899.2 → XP_027996700.1  RNA-binding protein 45 isoform X3

    Conserved Domains (4) summary
    cd12366
    Location:23 → 104
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:205 → 277
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:351 → 418
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins
    cl17169
    Location:120 → 190
    RRM_SF; RNA recognition motif (RRM) superfamily

  6. XM_028140900.2 → XP_027996701.1  RNA-binding protein 45 isoform X5

    Conserved Domains (3) summary
    cd12367
    Location:31 → 104
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:157 → 229
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:303 → 370
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins

RNA

  1. XR_003616362.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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