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PRICKLE1 prickle planar cell polarity protein 1 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103266238, updated on 11-Mar-2024

Summary

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Gene symbol
PRICKLE1
Gene description
prickle planar cell polarity protein 1
See related
Ensembl:ENSTSYG00000010748
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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See PRICKLE1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007251203.1 (1088376..1201277)

NW_007251203.1Genomic Context describing neighboring genes Neighboring gene nucleosome assembly protein 1-like 1 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 20 Neighboring gene 40S ribosomal protein S27-like pseudogene Neighboring gene periphilin 1 Neighboring gene zinc finger CCHC-type and RNA binding motif containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007251203 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prickle-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007251203.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    1088376..1201277
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008063857.2 → XP_008062048.1  prickle-like protein 1

    UniProtKB/TrEMBL
    A0A1U7U006
    Related
    ENSTSYP00000014334.1, ENSTSYT00000044119.1
    Conserved Domains (4) summary
    cd09418
    Location:189 → 244
    LIM2_Prickle; The second LIM domain of Prickle
    cd09420
    Location:249 → 307
    LIM3_Prickle; The third LIM domain of Prickle
    cd09483
    Location:126 → 184
    LIM1_Prickle_1; The first LIM domain of Prickle 1
    cd09827
    Location:22 → 118
    PET_Prickle; The PET domain of Prickle
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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