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TCEA2 transcription elongation factor A2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103262138, updated on 11-Mar-2024

Summary

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Gene symbol
TCEA2
Gene description
transcription elongation factor A2
See related
Ensembl:ENSTSYG00000026826
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007248444.1 (234120..239607, complement)

NW_007248444.1Genomic Context describing neighboring genes Neighboring gene LKAAEAR motif containing 1 Neighboring gene regulator of G protein signaling 19 Neighboring gene pre-mRNA processing factor 6 Neighboring gene zinc finger protein 512B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007248444 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor A protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007248444.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    234120..239607 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021713218.1 → XP_021568893.1  transcription elongation factor A protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q0E4E9
    Conserved Domains (1) summary
    cl02637
    Location:1 → 253
    TFIIS_M; Transcription factor S-II (TFIIS), central domain

  2. XM_008059752.2 → XP_008057943.1  transcription elongation factor A protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A1U7TNJ6
    Related
    ENSTSYP00000029235.1, ENSTSYT00000026039.1
    Conserved Domains (3) summary
    cd13749
    Location:197 → 241
    Zn-ribbon_TFIIS; domain III/zinc ribbon domain of Transcription Factor IIS
    pfam07500
    Location:81 → 188
    TFIIS_M; Transcription factor S-II (TFIIS), central domain
    cl00146
    Location:1 → 31
    TFIIS_I; N-terminal domain (domain I) of transcription elongation factor S-II (TFIIS); similar to a domain found in elongin A and CRSP70; likely to be involved in transcription; domain I from TFIIS interacts with RNA polymerase II holoenzyme
Nucleotide Protein
Heading Accession and Version

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