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SEC24A SEC24 homolog A, COPII coat complex component [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103260351, updated on 11-Mar-2024

Summary

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Gene symbol
SEC24A
Gene description
SEC24 homolog A, COPII coat complex component
See related
Ensembl:ENSTSYG00000000264
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007247278.1 (101909..184619, complement)

NW_007247278.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 46 Neighboring gene ubiquitin-conjugating enzyme E2 L3-like Neighboring gene calcium modulating ligand Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene secretion associated Ras related GTPase 1B Neighboring gene jade family PHD finger 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007247278 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007247278.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    101909..184619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021712319.1 → XP_021567994.1  protein transport protein Sec24A isoform X2

    UniProtKB/TrEMBL
    A0A3Q0DUR0
    Conserved Domains (1) summary
    cl27110
    Location:13 → 836
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger

  2. XM_008057998.2 → XP_008056189.1  protein transport protein Sec24A isoform X1

    UniProtKB/TrEMBL
    A0A1U7T810
    Related
    ENSTSYP00000000239.2, ENSTSYT00000000263.2
    Conserved Domains (6) summary
    COG5028
    Location:255 → 1093
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    cd01479
    Location:501 → 743
    Sec24-like; Sec24-like: Protein and membrane traffic in eukaryotes is mediated by at least in part by the budding and fusion of intracellular transport vesicles that selectively carry cargo proteins and lipids from donor to acceptor organelles. The two main classes ...
    pfam00626
    Location:964 → 1039
    Gelsolin; Gelsolin repeat
    pfam04810
    Location:428 → 464
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    pfam04815
    Location:843 → 938
    Sec23_helical; Sec23/Sec24 helical domain
    pfam08033
    Location:744 → 828
    Sec23_BS; Sec23/Sec24 beta-sandwich domain

  3. XM_008057999.1 → XP_008056190.1  protein transport protein Sec24A isoform X3

    UniProtKB/TrEMBL
    A0A1U7TEC0
    Related
    ENSTSYP00000016960.1, ENSTSYT00000046735.1
    Conserved Domains (2) summary
    pfam04810
    Location:428 → 464
    zf-Sec23_Sec24; Sec23/Sec24 zinc finger
    cl00057
    Location:501 → 610
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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