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PRP4K pre-mRNA processing factor kinase PRP4K [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103256169, updated on 11-Mar-2024

Summary

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Gene symbol
PRP4K
Gene description
pre-mRNA processing factor kinase PRP4K
See related
Ensembl:ENSTSYG00000002658
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Also known as
PRPF4B
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007021454.1 (53023..93255, complement)

NW_007021454.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C6orf201 homolog Neighboring gene family with sequence similarity 217 member A Neighboring gene uncharacterized LOC110595270 Neighboring gene 40S ribosomal protein S17 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007021454 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-threonine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PRP4 homolog
Names
pre-mRNA processing factor 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007021454.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    53023..93255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021710378.1 → XP_021566053.1  serine/threonine-protein kinase PRP4 homolog

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  2. XM_021710379.1 → XP_021566054.1  serine/threonine-protein kinase PRP4 homolog

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  3. XM_008054102.1 → XP_008052293.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052293.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  4. XM_008054073.1 → XP_008052264.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052264.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  5. XM_008054096.1 → XP_008052287.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052287.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  6. XM_008054081.1 → XP_008052272.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052272.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  7. XM_008054087.1 → XP_008052278.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052278.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  8. XM_008054066.1 → XP_008052257.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052257.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Related
    ENSTSYP00000019636.1, ENSTSYT00000030436.1
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  9. XM_008054108.1 → XP_008052299.1  serine/threonine-protein kinase PRP4 homolog

    See identical proteins and their annotated locations for XP_008052299.1

    UniProtKB/TrEMBL
    A0A1U7TH31
    Related
    ENSTSYP00000002460.2, ENSTSYT00000002673.2
    Conserved Domains (2) summary
    cd14135
    Location:719 → 1036
    STKc_PRP4; Catalytic domain of the Serine/Threonine Kinase, Pre-mRNA-Processing factor 4
    cl28033
    Location:316 → 460
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
Nucleotide Protein
Heading Accession and Version

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