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ADAMTS2 ADAM metallopeptidase with thrombospondin type 1 motif 2 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103250957, updated on 11-Mar-2024

Summary

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Gene symbol
ADAMTS2
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 2
See related
Ensembl:ENSTSYG00000032953
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007079824.1 (56550..178987)

NW_007079824.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007079824 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007079824.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    56550..178987
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021708302.1 → XP_021563977.1  A disintegrin and metalloproteinase with thrombospondin motifs 2

    UniProtKB/TrEMBL
    A0A3Q0DNG8
    Related
    ENSTSYP00000027378.1, ENSTSYT00000039324.1
    Conserved Domains (4) summary
    smart00209
    Location:388 → 440
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:90 → 291
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam01562
    Location:1 → 34
    Pep_M12B_propep; Reprolysin family propeptide
    pfam05986
    Location:547 → 661
    ADAM_spacer1; ADAM-TS Spacer 1
Nucleotide Protein
Heading Accession and Version

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