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NCAM2 neural cell adhesion molecule 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103218029, updated on 11-Mar-2024

Summary

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Gene symbol
NCAM2
Gene description
neural cell adhesion molecule 2
See related
Ensembl:ENSCSAG00000008925
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666050.1 (82397301..82957086)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 2 NC_023643.1 (71075834..71622707, complement)

NW_023666050.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A-like Neighboring gene heat shock cognate 71 kDa protein-like Neighboring gene THUMP domain-containing protein 3-like Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neural cell adhesion molecule 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666050.1 Reference Vero_WHO_p1.0

    Range
    82397301..82957086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007966565.2 → XP_007964756.1  neural cell adhesion molecule 2 isoform X1

    Conserved Domains (8) summary
    cd05866
    Location:21 → 112
    Ig1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2
    cd05870
    Location:300 → 397
    Ig5_NCAM-2; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)
    smart00408
    Location:128 → 189
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:308 → 395
    IG_like; Immunoglobulin like
    cd00063
    Location:496 → 588
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:22 → 111
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:594 → 678
    fn3; Fibronectin type III domain
    cl11960
    Location:208 → 301
    Ig; Immunoglobulin domain

  2. XM_037982819.1 → XP_037838747.1  neural cell adhesion molecule 2 isoform X3

    Conserved Domains (8) summary
    cd05870
    Location:300 → 397
    IgI_NCAM-2; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 2 (NCAM-2)
    smart00408
    Location:128 → 189
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:496 → 588
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:594 → 678
    fn3; Fibronectin type III domain
    pfam13927
    Location:401 → 479
    Ig_3; Immunoglobulin domain
    cd00096
    Location:131 → 138
    Ig; Ig strand B [structural motif]
    cd05866
    Location:21 → 113
    IgI_1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2; member of the I-set of Ig superfamily (IgSF) domains
    cd20970
    Location:209 → 298
    IgI_1_MuSK; agrin-responsive first immunoglobulin-like domains (Ig1) of the MuSK ectodomain; a member of the I-set of IgSF domains

  3. XM_037982820.1 → XP_037838748.1  neural cell adhesion molecule 2 isoform X4

    Conserved Domains (8) summary
    cd05870
    Location:300 → 397
    IgI_NCAM-2; Immunoglobulin (Ig)-like I-set domain of Neural Cell Adhesion Molecule 2 (NCAM-2)
    smart00408
    Location:128 → 189
    IGc2; Immunoglobulin C-2 Type
    cd00063
    Location:496 → 588
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam00041
    Location:594 → 678
    fn3; Fibronectin type III domain
    pfam13927
    Location:401 → 479
    Ig_3; Immunoglobulin domain
    cd00096
    Location:131 → 138
    Ig; Ig strand B [structural motif]
    cd05866
    Location:21 → 113
    IgI_1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2; member of the I-set of Ig superfamily (IgSF) domains
    cd20970
    Location:209 → 298
    IgI_1_MuSK; agrin-responsive first immunoglobulin-like domains (Ig1) of the MuSK ectodomain; a member of the I-set of IgSF domains

  4. XM_007966576.2 → XP_007964767.1  neural cell adhesion molecule 2 isoform X2

    UniProtKB/TrEMBL
    A0A0D9R994
    Related
    ENSCSAP00000005183.1
    Conserved Domains (8) summary
    cd05866
    Location:5 → 96
    Ig1_NCAM-2; First immunoglobulin (Ig)-like domain of neural cell adhesion molecule NCAM-2
    cd05870
    Location:284 → 381
    Ig5_NCAM-2; Fifth immunoglobulin (Ig)-like domain of Neural Cell Adhesion Molecule NCAM-2 (also known as OCAM/mamFas II and RNCAM)
    smart00408
    Location:112 → 173
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:292 → 379
    IG_like; Immunoglobulin like
    cd00063
    Location:480 → 572
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:6 → 95
    I-set; Immunoglobulin I-set domain
    pfam00041
    Location:578 → 662
    fn3; Fibronectin type III domain
    cl11960
    Location:192 → 285
    Ig; Immunoglobulin domain
Nucleotide Protein
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