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SKIL SKI like proto-oncogene [ Orycteropus afer afer ]

Gene ID: 103201875, updated on 11-Mar-2024

Summary

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Gene symbol
SKIL
Gene description
SKI like proto-oncogene
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921755.1 (2521940..2549326, complement)

NW_006921755.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 7 member 14 Neighboring gene claudin 11 Neighboring gene 60S ribosomal protein L13a-like Neighboring gene protein kinase C iota

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921755 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SMAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ski-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921755.1 Reference OryAfe1.0 Primary Assembly

    Range
    2521940..2549326 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007946625.1 → XP_007944816.1  ski-like protein

    UniProtKB/TrEMBL
    A0A8B7ABJ2, A0A8B7AFQ7
    Conserved Domains (5) summary
    smart01046
    Location:262 → 357
    c-SKI_SMAD_bind; c-SKI Smad4 binding domain
    pfam01442
    Location:532 → 676
    Apolipoprotein; Apolipoprotein A1/A4/E domain
    pfam02437
    Location:137 → 236
    Ski_Sno; SKI/SNO/DAC family
    cd16269
    Location:640 → 651
    GBP_C; coiled coil [structural motif]
    cl20817
    Location:525 → 673
    GBP_C; Guanylate-binding protein, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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