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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030357.1 RefSeqGene
- Range
-
5031..44151
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001145097.2 → NP_001138569.1 ski-like protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as SnoN2) differs in the 5' UTR and uses an alternate in-frame splice site in the coding region compared to variant 1. The resulting protein (isoform 2) is shorter compared to isoform 1.
- Source sequence(s)
-
AC073288, AI245308, U70730
- Consensus CDS
-
CCDS46953.1
- UniProtKB/Swiss-Prot
-
P12757
- Related
- ENSP00000400193.2, ENST00000413427.6
- Conserved Domains (4) summary
-
- smart01046
Location:261 → 356
- c-SKI_SMAD_bind; c-SKI Smad4 binding domain
- pfam02437
Location:136 → 235
- Ski_Sno; SKI/SNO/DAC family
- cd16269
Location:593 → 604
- GBP_C; coiled coil [structural motif]
- cl20817
Location:478 → 626
- GBP_C; Guanylate-binding protein, C-terminal domain
-
NM_001145098.3 → NP_001138570.1 ski-like protein isoform 3
See identical proteins and their annotated locations for NP_001138570.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding region, and uses a downstream start codon compared to variant 1. The resulting protein (isoform 3) is shorter compared to isoform 1.
- Source sequence(s)
-
AC073288, AI245308, AK300053, DA464211
- Consensus CDS
-
CCDS46954.1
- UniProtKB/Swiss-Prot
-
P12757
- Related
- ENSP00000406520.2, ENST00000426052.6
- Conserved Domains (4) summary
-
- smart01046
Location:241 → 336
- c-SKI_SMAD_bind; c-SKI Smad4 binding domain
- pfam02437
Location:116 → 215
- Ski_Sno; SKI/SNO/DAC family
- cd16269
Location:619 → 630
- GBP_C; coiled coil [structural motif]
- cl20817
Location:504 → 652
- GBP_C; Guanylate-binding protein, C-terminal domain
-
NM_001248008.1 → NP_001234937.1 ski-like protein isoform 1
See identical proteins and their annotated locations for NP_001234937.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1 and 4 both encode the same isoform (1).
- Source sequence(s)
-
AC073288, AI245308, X15219
- Consensus CDS
-
CCDS33890.1
- UniProtKB/Swiss-Prot
- P12757, Q07501
- Related
- ENSP00000415243.3, ENST00000458537.7
- Conserved Domains (4) summary
-
- smart01046
Location:261 → 356
- c-SKI_SMAD_bind; c-SKI Smad4 binding domain
- pfam02437
Location:136 → 235
- Ski_Sno; SKI/SNO/DAC family
- cd16269
Location:639 → 650
- GBP_C; coiled coil [structural motif]
- cl20817
Location:524 → 672
- GBP_C; Guanylate-binding protein, C-terminal domain
-
NM_005414.5 → NP_005405.2 ski-like protein isoform 1
See identical proteins and their annotated locations for NP_005405.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1, also known as snoN).
- Source sequence(s)
-
AC073288, AI245308, BC059386, DA464211, X15219
- Consensus CDS
-
CCDS33890.1
- UniProtKB/Swiss-Prot
- P12757, Q07501
- Related
- ENSP00000259119.4, ENST00000259119.9
- Conserved Domains (4) summary
-
- smart01046
Location:261 → 356
- c-SKI_SMAD_bind; c-SKI Smad4 binding domain
- pfam02437
Location:136 → 235
- Ski_Sno; SKI/SNO/DAC family
- cd16269
Location:639 → 650
- GBP_C; coiled coil [structural motif]
- cl20817
Location:524 → 672
- GBP_C; Guanylate-binding protein, C-terminal domain