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TLX1 T cell leukemia homeobox 1 [ Orycteropus afer afer ]

Gene ID: 103196315, updated on 11-Mar-2024

Summary

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Gene symbol
TLX1
Gene description
T cell leukemia homeobox 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921651.1 (5766537..5771953, complement)

NW_006921651.1Genomic Context describing neighboring genes Neighboring gene beta-transducin repeat containing E3 ubiquitin protein ligase Neighboring gene ladybird homeobox 1 Neighboring gene Kazal type serine peptidase inhibitor domain 1 Neighboring gene sideroflexin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921651 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in animal organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-cell leukemia homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921651.1 Reference OryAfe1.0 Primary Assembly

    Range
    5766537..5771953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007940027.1 → XP_007938218.1  T-cell leukemia homeobox protein 1

    UniProtKB/TrEMBL
    A0A8B6ZR81
    Conserved Domains (1) summary
    pfam00046
    Location:114 → 167
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

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