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supt7l SPT7 like, STAGA complex subunit gamma [ Callorhinchus milii (elephant shark) ]

Gene ID: 103189619, updated on 11-Mar-2024

Summary

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Gene symbol
supt7l
Gene description
SPT7 like, STAGA complex subunit gamma
See related
Ensembl:ENSCMIG00000015707
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (92920768..92930627, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890338.1 (396569..403997, complement)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat and fibronectin type-III domain-containing protein 2 Neighboring gene transfer RNA alanine (anticodon GGC) Neighboring gene solute carrier family 4 member 1 adaptor protein Neighboring gene uncharacterized si:dkey-16j16.4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: STAGA complex 65 subunit gamma
Names
SPT7 like, STAGA complex gamma subunit
STAGA complex 65 subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    92920768..92930627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042333695.1 → XP_042189629.1  LOW QUALITY PROTEIN: STAGA complex 65 subunit gamma

    UniProtKB/TrEMBL
    V9KL15
    Conserved Domains (1) summary
    cl22885
    Location:147 → 222
    TAF9; TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
Nucleotide Protein
Heading Accession and Version

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