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ccnyl1 cyclin Y-like 1 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103176822, updated on 11-Mar-2024

Summary

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Gene symbol
ccnyl1
Gene description
cyclin Y-like 1
See related
Ensembl:ENSCMIG00000005114
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704747.1 (17047223..17067230, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890069.1 (118155..138190)

NW_024704747.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family M, member 3 Neighboring gene frizzled-5 Neighboring gene methyltransferase 21A, HSPA lysine Neighboring gene cyclic AMP-responsive element-binding protein 1 Neighboring gene HIV-1 Tat specific factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cyclin-dependent protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclin-Y-like protein 1
Names
cyclin-Y-like protein 1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704747.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    17047223..17067230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007890590.2 → XP_007888781.1  cyclin-Y-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A4W3H1T5
    Related
    ENSCMIP00000009686.1
    Conserved Domains (1) summary
    pfam00134
    Location:154 → 276
    Cyclin_N; Cyclin, N-terminal domain

  2. XM_007890589.2 → XP_007888780.1  cyclin-Y-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_007888780.1

    UniProtKB/TrEMBL
    A0A4W3H1T5, V9KT64
    Related
    ENSCMIP00000009681.1
    Conserved Domains (1) summary
    pfam00134
    Location:160 → 282
    Cyclin_N; Cyclin, N-terminal domain

  3. XM_007890591.2 → XP_007888782.1  cyclin-Y-like protein 1 isoform X3

    Conserved Domains (1) summary
    pfam00134
    Location:58 → 180
    Cyclin_N; Cyclin, N-terminal domain
Nucleotide Protein
Heading Accession and Version

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