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LOC103175988 zinc finger protein 821 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103175988, updated on 11-Mar-2024

Summary

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Gene symbol
LOC103175988
Gene description
zinc finger protein 821
See related
Ensembl:ENSCMIG00000014709
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
znf821
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704755.1 (5319737..5329833, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890065.1 (3918159..3928341, complement)

NW_024704755.1Genomic Context describing neighboring genes Neighboring gene NIN1 (RPN12) binding protein 1 homolog Neighboring gene ataxin-1-like Neighboring gene adenine phosphoribosyltransferase Neighboring gene chromatin licensing and DNA replication factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequencing and analysis of full-length cDNAs, 5'-ESTs and 3'-ESTs from a cartilaginous fish, the elephant shark (Callorhinchus milii). Tan YY, et al. PLoS One, 2012. PMID 23056606, Free PMC Article
  2. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 821
Names
zinc finger protein 821-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704755.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    5319737..5329833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007889314.2 → XP_007887505.2  zinc finger protein 821

    UniProtKB/TrEMBL
    A0A4W3J516, V9KY04
    Conserved Domains (2) summary
    sd00017
    Location:87 → 107
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam17380
    Location:213 → 318
    DUF5401; Family of unknown function (DUF5401)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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