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lcmt2 leucine carboxyl methyltransferase 2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103156737, updated on 11-Mar-2024

Summary

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Gene symbol
lcmt2
Gene description
leucine carboxyl methyltransferase 2
See related
Ensembl:ENSPFOG00000000342
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800435.1 (149410..155256, complement)

NW_006800435.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3b, subunit 1 Neighboring gene ankyrin repeat domain 44 Neighboring gene ras-related protein Rab-5B-like Neighboring gene ras-related protein Rab-5B-like Neighboring gene debranching RNA lariats 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800435.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wybutosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA wybutosine-synthesizing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800435.1 Reference Poecilia_formosa-5.1.2

    Range
    149410..155256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016664561.1 → XP_016520047.1  tRNA wybutosine-synthesizing protein 4

    UniProtKB/TrEMBL
    A0A096LVP1
    Related
    ENSPFOP00000023232.1, ENSPFOT00000024965.1
    Conserved Domains (3) summary
    sd00038
    Location:490 → 539
    Kelch; KELCH repeat [structural motif]
    pfam04072
    Location:48 → 228
    LCM; Leucine carboxyl methyltransferase
    pfam13415
    Location:501 → 551
    Kelch_3; Galactose oxidase, central domain
Nucleotide Protein
Heading Accession and Version

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