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taf10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor [ Poecilia formosa (Amazon molly) ]

Gene ID: 103138996, updated on 11-Mar-2024

Summary

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Gene symbol
taf10
Gene description
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
See related
Ensembl:ENSPFOG00000011536
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799995.1 (2484570..2488287, complement)

NW_006799995.1Genomic Context describing neighboring genes Neighboring gene Y box binding protein 1 Neighboring gene uncharacterized LOC103138993 Neighboring gene peptidylprolyl isomerase H (cyclophilin H) Neighboring gene uncharacterized LOC103138997 Neighboring gene ERBB receptor feedback inhibitor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799995.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables promoter-specific chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription initiation at RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SAGA complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 10
Names
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associat
TATA-box binding protein associated factor 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799995.1 Reference Poecilia_formosa-5.1.2

    Range
    2484570..2488287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007553427.2 → XP_007553489.1  transcription initiation factor TFIID subunit 10 isoform X2

    See identical proteins and their annotated locations for XP_007553489.1

    Conserved Domains (1) summary
    cd07982
    Location:81 → 183
    TAF10; The TATA Binding Protein (TBP) Associated Factor 10

  2. XM_007553426.2 → XP_007553488.1  transcription initiation factor TFIID subunit 10 isoform X1

    See identical proteins and their annotated locations for XP_007553488.1

    UniProtKB/TrEMBL
    A0A087Y0I6
    Related
    ENSPFOP00000011539.1, ENSPFOT00000011555.1
    Conserved Domains (1) summary
    cd07982
    Location:83 → 185
    TAF10; The TATA Binding Protein (TBP) Associated Factor 10
Nucleotide Protein
Heading Accession and Version

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