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CLIP3 CAP-Gly domain containing linker protein 3 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103126047, updated on 11-Mar-2024

Summary

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Gene symbol
CLIP3
Gene description
CAP-Gly domain containing linker protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 2 NC_080163.1 (184399013..184416908, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804909.1 (363987..399455, complement)

Chromosome 2 - NC_080163.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope family member 4 Neighboring gene alkB homolog 6 Neighboring gene THAP domain containing 8 Neighboring gene WD repeat domain 62

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CAP-Gly domain-containing linker protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080163.1 Reference mEriEur2.1

    Range
    184399013..184416908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016194222.2 → XP_016049708.1  CAP-Gly domain-containing linker protein 3

    UniProtKB/TrEMBL
    A0A1S3WTK5
    Conserved Domains (4) summary
    cd00204
    Location:112 → 234
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01302
    Location:417 → 480
    CAP_GLY; CAP-Gly domain
    pfam12796
    Location:122 → 228
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:120 → 157
    ANK; ANK repeat [structural motif]

  2. XM_016194223.2 → XP_016049709.1  CAP-Gly domain-containing linker protein 3

    UniProtKB/TrEMBL
    A0A1S3WTK5
    Conserved Domains (4) summary
    cd00204
    Location:112 → 234
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam01302
    Location:417 → 480
    CAP_GLY; CAP-Gly domain
    pfam12796
    Location:122 → 228
    Ank_2; Ankyrin repeats (3 copies)
    sd00045
    Location:120 → 157
    ANK; ANK repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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