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TMLHE trimethyllysine hydroxylase, epsilon [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103125827, updated on 11-Mar-2024

Summary

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Gene symbol
TMLHE
Gene description
trimethyllysine hydroxylase, epsilon
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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See TMLHE in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) X NC_080185.1 (471637..541903)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804885.1 (229337..271291, complement)

Chromosome X - NC_080185.1Genomic Context describing neighboring genes Neighboring gene vesicle associated membrane protein 7 Neighboring gene sprouty RTK signaling antagonist 3 Neighboring gene 40-kDa huntingtin-associated protein-like Neighboring gene chloride intracellular channel 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables trimethyllysine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trimethyllysine dioxygenase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080185.1 Reference mEriEur2.1

    Range
    471637..541903
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060182867.1 → XP_060038850.1  trimethyllysine dioxygenase, mitochondrial

    UniProtKB/TrEMBL
    A0A1S3ALA3

  2. XM_060182868.1 → XP_060038851.1  trimethyllysine dioxygenase, mitochondrial

    UniProtKB/TrEMBL
    A0A1S3ALA3

  3. XM_060182869.1 → XP_060038852.1  trimethyllysine dioxygenase, mitochondrial

    UniProtKB/TrEMBL
    A0A1S3ALA3

RNA

  1. XR_009547491.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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