U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZRANB1 zinc finger RANBP2-type containing 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103085760, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ZRANB1
Gene description
zinc finger RANBP2-type containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006796565.1 (666871..711602, complement)

NW_006796565.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S27-like Neighboring gene C-terminal binding protein 2 Neighboring gene abraxas 2, BRISC complex subunit Neighboring gene EEF1A lysine methyltransferase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006796565 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K29-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K33-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ubiquitin thioesterase ZRANB1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006796565.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    666871..711602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007468728.1 → XP_007468790.1  ubiquitin thioesterase ZRANB1

    UniProtKB/TrEMBL
    A0A340YBI9
    Conserved Domains (3) summary
    smart00547
    Location:178 → 201
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:114 → 133
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam02338
    Location:464 → 612
    OTU; OTU-like cysteine protease

  2. XM_007468727.1 → XP_007468789.1  ubiquitin thioesterase ZRANB1

    UniProtKB/TrEMBL
    A0A340YAD0
    Conserved Domains (3) summary
    smart00547
    Location:185 → 208
    ZnF_RBZ; Zinc finger domain
    sd00029
    Location:121 → 140
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam02338
    Location:471 → 619
    OTU; OTU-like cysteine protease
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.