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RIMS2 regulating synaptic membrane exocytosis 2 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103076668, updated on 11-Mar-2024

Summary

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Gene symbol
RIMS2
Gene description
regulating synaptic membrane exocytosis 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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See RIMS2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006792103.1 (353379..936940)

NW_006792103.1Genomic Context describing neighboring genes Neighboring gene HMG domain-containing protein 4-like Neighboring gene solute carrier family 25 member 32 Neighboring gene DDB1 and CUL4 associated factor 13 Neighboring gene actin-related protein 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006792103 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane transporter binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion-regulated exocytosis of neurotransmitter IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic plasticity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton of presynaptic active zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in presynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulating synaptic membrane exocytosis protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006792103.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    353379..936940
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007465316.1 → XP_007465378.1  regulating synaptic membrane exocytosis protein 2

    UniProtKB/TrEMBL
    A0A340XVZ3
    Conserved Domains (4) summary
    cd04028
    Location:1180 → 1325
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:746 → 869
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    cd00992
    Location:593 → 674
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl22851
    Location:30 → 154
    PHD_SF; PHD finger superfamily

  2. XM_007465315.1 → XP_007465377.1  regulating synaptic membrane exocytosis protein 2

    UniProtKB/TrEMBL
    A0A340XYR0
    Conserved Domains (5) summary
    cd04028
    Location:1388 → 1533
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:746 → 869
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    PHA02666
    Location:970 → 1072
    PHA02666; hypothetical protein; Provisional
    cd00992
    Location:593 → 674
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    cl22851
    Location:30 → 154
    PHD_SF; PHD finger superfamily

  3. XM_007465318.1 → XP_007465380.1  regulating synaptic membrane exocytosis protein 2

    UniProtKB/TrEMBL
    A0A340Y1P9
    Conserved Domains (3) summary
    cd04028
    Location:1019 → 1164
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:582 → 708
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    cd00992
    Location:448 → 529
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  4. XM_007465319.1 → XP_007465381.1  regulating synaptic membrane exocytosis protein 2

    UniProtKB/TrEMBL
    A0A340XVJ2
    Conserved Domains (4) summary
    cd04028
    Location:994 → 1139
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:535 → 661
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    PHA02666
    Location:762 → 864
    PHA02666; hypothetical protein; Provisional
    cd00992
    Location:401 → 482
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  5. XM_007465317.1 → XP_007465379.1  regulating synaptic membrane exocytosis protein 2

    UniProtKB/TrEMBL
    A0A340Y189
    Conserved Domains (4) summary
    cd04028
    Location:1196 → 1341
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
    cd04031
    Location:554 → 677
    C2A_RIM1alpha; C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins
    PHA02666
    Location:778 → 880
    PHA02666; hypothetical protein; Provisional
    cd00992
    Location:401 → 482
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...

  6. XM_007465321.1 → XP_007465383.1  regulating synaptic membrane exocytosis protein 2

    See identical proteins and their annotated locations for XP_007465383.1

    UniProtKB/TrEMBL
    A0A340XVZ8
    Conserved Domains (1) summary
    cd04028
    Location:115 → 260
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins

  7. XM_007465320.1 → XP_007465382.1  regulating synaptic membrane exocytosis protein 2

    See identical proteins and their annotated locations for XP_007465382.1

    UniProtKB/TrEMBL
    A0A340XYR5
    Conserved Domains (1) summary
    cd04028
    Location:116 → 261
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins

  8. XM_007465322.1 → XP_007465384.1  regulating synaptic membrane exocytosis protein 2

    See identical proteins and their annotated locations for XP_007465384.1

    UniProtKB/TrEMBL
    A0A340Y194
    Conserved Domains (1) summary
    cd04028
    Location:100 → 245
    C2B_RIM1alpha; C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins
Nucleotide Protein
Heading Accession and Version

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