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SNRPF small nuclear ribonucleoprotein polypeptide F [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103072935, updated on 11-Mar-2024

Summary

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Gene symbol
SNRPF
Gene description
small nuclear ribonucleoprotein polypeptide F
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006780221.1 (571017..579673, complement)

NW_006780221.1Genomic Context describing neighboring genes Neighboring gene histidine ammonia-lyase Neighboring gene amidohydrolase domain containing 1 Neighboring gene coiled-coil domain containing 38

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006780221 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal snRNP assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U1 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small nuclear ribonucleoprotein F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006780221.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    571017..579673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007453349.1 → XP_007453411.1  small nuclear ribonucleoprotein F

    See identical proteins and their annotated locations for XP_007453411.1

    UniProtKB/TrEMBL
    A0A340WWJ4
    Conserved Domains (1) summary
    cd01722
    Location:6 → 74
    Sm_F; Sm protein F
Nucleotide Protein
Heading Accession and Version

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