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ANK3 ankyrin 3, node of Ranvier (ankyrin G) [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103072855, updated on 16-Nov-2023

Summary

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Gene symbol
ANK3
Gene description
ankyrin 3, node of Ranvier (ankyrin G)
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
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Genomic context

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See ANK3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
47
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006786251.1 (249994..572702)

NW_006786251.1Genomic Context describing neighboring genes Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2-like Neighboring gene high mobility group nucleosomal binding domain 2 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006786251 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in T-tubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin-3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006786251.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    249994..572702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007458433.1 → XP_007458495.1  ankyrin-3-like

    UniProtKB/TrEMBL
    A0A340XHJ1
    Conserved Domains (6) summary
    smart00218
    Location:982 → 1086
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd08803
    Location:4088 → 4171
    Death_ank3; Death domain of Ankyrin-3
    cd00204
    Location:460 → 585
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:78 → 164
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:631 → 684
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:465 → 496
    ANK; ANK repeat [structural motif]

  2. XM_007458434.1 → XP_007458496.1  ankyrin-3-like

    UniProtKB/TrEMBL
    A0A340XAP2
    Conserved Domains (2) summary
    smart00218
    Location:116 → 220
    ZU5; Domain present in ZO-1 and Unc5-like netrin receptors
    cd08803
    Location:609 → 692
    Death_ank3; Death domain of Ankyrin-3
Nucleotide Protein
Heading Accession and Version

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