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MYO1B myosin IB [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103068561, updated on 11-Mar-2024

Summary

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Gene symbol
MYO1B
Gene description
myosin IB
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006791919.1 (1125560..1312603, complement)

NW_006791919.1Genomic Context describing neighboring genes Neighboring gene caveolae associated protein 2 Neighboring gene nucleic acid binding protein 1 Neighboring gene transmembrane protein 216-like Neighboring gene signal transducer and activator of transcription 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006791919 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microfilament motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle transport along actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in brush border IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
unconventional myosin-Ib

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006791919.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    1125560..1312603 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007464958.1 → XP_007465020.1  unconventional myosin-Ib

    UniProtKB/TrEMBL
    A0A340Y0K6
    Conserved Domains (3) summary
    smart00242
    Location:16 → 701
    MYSc; Myosin. Large ATPases
    cd01378
    Location:29 → 688
    MYSc_Myo1; class I myosin, motor domain
    pfam06017
    Location:946 → 1120
    Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding
Nucleotide Protein
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