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ZC3H6 zinc finger CCCH-type containing 6 [ Python bivittatus (Burmese python) ]

Gene ID: 103068239, updated on 11-Mar-2024

Summary

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Gene symbol
ZC3H6
Gene description
zinc finger CCCH-type containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532750.1 (216806..250015, complement)

NW_006532750.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene RNA polymerase I subunit B Neighboring gene tubulin tyrosine ligase Neighboring gene fibulin 7 Neighboring gene MER proto-oncogene, tyrosine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532750 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger CCCH domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532750.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    216806..250015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025165666.1 → XP_025021434.1  zinc finger CCCH domain-containing protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A9F5IVB1
    Conserved Domains (3) summary
    smart00356
    Location:321 → 345
    ZnF_C3H1; zinc finger
    pfam15663
    Location:318 → 377
    zf-CCCH_3; Zinc-finger containing family
    cl26464
    Location:406 → 599
    Atrophin-1; Atrophin-1 family

  2. XM_025165665.1 → XP_025021433.1  zinc finger CCCH domain-containing protein 6 isoform X1

    UniProtKB/TrEMBL
    A0A9F5IQ91
    Conserved Domains (3) summary
    smart00356
    Location:322 → 346
    ZnF_C3H1; zinc finger
    pfam15663
    Location:319 → 378
    zf-CCCH_3; Zinc-finger containing family
    cl26464
    Location:407 → 600
    Atrophin-1; Atrophin-1 family

  3. XM_025165668.1 → XP_025021436.1  zinc finger CCCH domain-containing protein 6 isoform X6

    UniProtKB/TrEMBL
    A0A9F5IYQ0
    Conserved Domains (3) summary
    smart00356
    Location:294 → 318
    ZnF_C3H1; zinc finger
    pfam15663
    Location:291 → 350
    zf-CCCH_3; Zinc-finger containing family
    cl26464
    Location:379 → 572
    Atrophin-1; Atrophin-1 family

  4. XM_007426621.2 → XP_007426683.1  zinc finger CCCH domain-containing protein 6 isoform X5

    UniProtKB/TrEMBL
    A0A9F2Q432
    Conserved Domains (2) summary
    smart00356
    Location:302 → 326
    ZnF_C3H1; zinc finger
    pfam00642
    Location:328 → 350
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  5. XM_007426620.2 → XP_007426682.1  zinc finger CCCH domain-containing protein 6 isoform X4

    UniProtKB/TrEMBL
    A0A9F2QWG5
    Conserved Domains (2) summary
    smart00356
    Location:303 → 327
    ZnF_C3H1; zinc finger
    pfam00642
    Location:329 → 351
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  6. XM_025165667.1 → XP_025021435.1  zinc finger CCCH domain-containing protein 6 isoform X3

    UniProtKB/TrEMBL
    A0A9F5IIQ4
    Conserved Domains (3) summary
    smart00356
    Location:304 → 328
    ZnF_C3H1; zinc finger
    pfam15663
    Location:301 → 360
    zf-CCCH_3; Zinc-finger containing family
    cl26464
    Location:389 → 582
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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