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HACD1 3-hydroxyacyl-CoA dehydratase 1 [ Python bivittatus (Burmese python) ]

Gene ID: 103067518, updated on 11-Mar-2024

Summary

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Gene symbol
HACD1
Gene description
3-hydroxyacyl-CoA dehydratase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Also known as
PTPLA
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532209.1 (124324..141523, complement)

NW_006532209.1Genomic Context describing neighboring genes Neighboring gene vimentin Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 Neighboring gene signal transducing adaptor molecule Neighboring gene mannose receptor C-type 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532209 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1
Names
protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532209.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    124324..141523 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025177682.1 → XP_025033450.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X2

    UniProtKB/TrEMBL
    A0A9F5J304
    Conserved Domains (1) summary
    pfam04387
    Location:79 → 236
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_025177681.1 → XP_025033449.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 isoform X1

    UniProtKB/TrEMBL
    A0A9F5JDF7
    Conserved Domains (1) summary
    pfam04387
    Location:79 → 238
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
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