U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CPSF2 cleavage and polyadenylation specific factor 2 [ Python bivittatus (Burmese python) ]

Gene ID: 103053041, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
CPSF2
Gene description
cleavage and polyadenylation specific factor 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532220.1 (474763..494658, complement)

NW_006532220.1Genomic Context describing neighboring genes Neighboring gene Ras and Rab interactor 3 Neighboring gene solute carrier family 24 member 4 Neighboring gene NADH:ubiquinone oxidoreductase subunit B1 Neighboring gene ataxin 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006532220 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cleavage and polyadenylation specificity factor subunit 2
Names
cleavage and polyadenylation specific factor 2, 100kDa

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532220.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    474763..494658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007422538.3 → XP_007422600.1  cleavage and polyadenylation specificity factor subunit 2

    UniProtKB/TrEMBL
    A0A9F2NVE3
    Conserved Domains (5) summary
    smart01027
    Location:243 → 368
    Beta-Casp; Beta-Casp domain
    COG1236
    Location:5 → 385
    YSH1; RNA processing exonuclease, beta-lactamase fold, Cft2 family [Translation, ribosomal structure and biogenesis]
    pfam07521
    Location:527 → 566
    RMMBL; RNA-metabolizing metallo-beta-lactamase
    pfam13299
    Location:608 → 780
    CPSF100_C; Cleavage and polyadenylation factor 2 C-terminal
    cd16293
    Location:7 → 204
    CPSF2-like_MBL-fold; cleavage and polyadenylation specificity factor (CPSF) subunit 2 and related proteins; MBL-fold metallo-hydrolase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.