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HIVEP3 HIVEP zinc finger 3 [ Python bivittatus (Burmese python) ]

Gene ID: 103049477, updated on 11-Mar-2024

Summary

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Gene symbol
HIVEP3
Gene description
HIVEP zinc finger 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Python bivittatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Henophidia; Pythonidae; Python
Orthologs
human mouse all
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Genomic context

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See HIVEP3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Python_molurus_bivittatus-5.0.2 (GCF_000186305.1) Unplaced Scaffold NW_006532544.1 (125233..327706, complement)

NW_006532544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112540324 Neighboring gene uncharacterized LOC112540323 Neighboring gene endothelin 2 Neighboring gene serine incorporator 2 Neighboring gene fatty acid-binding protein, heart Neighboring gene zinc finger CCHC-type containing 17

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006532544 Unplaced Scaffold Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor HIVEP3
Names
human immunodeficiency virus type I enhancer binding protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Python bivittatus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

Genomic

  1. NW_006532544.1 Reference Python_molurus_bivittatus-5.0.2 Primary Assembly

    Range
    125233..327706 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025164859.1 → XP_025020627.1  transcription factor HIVEP3

    UniProtKB/TrEMBL
    A0A9F5II88
    Conserved Domains (5) summary
    smart00451
    Location:1780 → 1814
    ZnF_U1; U1-like zinc finger
    sd00017
    Location:186 → 206
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:1757 → 1777
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1755 → 1777
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:199 → 223
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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