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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_030026.2 RefSeqGene
- Range
-
122004..534561
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001127714.3 → NP_001121186.1 transcription factor HIVEP3 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate exon in the 5' UTR and uses an alternate splice site in the 3' coding region, compared to variant 1. The resulting isoform (b) is shorter than isoform a.
- Source sequence(s)
-
AC105268, AC119676, AI082114, AL445933, BC152563
- Consensus CDS
-
CCDS44124.1
- UniProtKB/Swiss-Prot
-
Q5T1R4
- Related
- ENSP00000361665.1, ENST00000372584.5
- Conserved Domains (3) summary
-
- sd00017
Location:194 → 214
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:1754 → 1776
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:207 → 231
- zf-H2C2_2; Zinc-finger double domain
-
NM_024503.5 → NP_078779.2 transcription factor HIVEP3 isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC105268, AF278765, AI082114, AL445933, BC152563
- Consensus CDS
-
CCDS463.1
- UniProtKB/Swiss-Prot
- A7YY91, Q5T1R4, Q5T1R5, Q9BZS0, Q9HCL7
- Related
- ENSP00000361664.1, ENST00000372583.6
- Conserved Domains (4) summary
-
- sd00017
Location:194 → 214
- ZF_C2H2; C2H2 Zn finger [structural motif]
- pfam00096
Location:1754 → 1776
- zf-C2H2; Zinc finger, C2H2 type
- pfam13465
Location:207 → 231
- zf-H2C2_2; Zinc-finger double domain
- cl26464
Location:1877 → 2395
- Atrophin-1; Atrophin-1 family
RNA
-
NR_038260.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks all but the first exon and contains two alternate 3' exons, compared to variant 1. This variant is represented as non-coding because it lacks the coding region, including the translational start codon, found in variant 1.
- Source sequence(s)
-
AC105268, BC040942, BG213993, DA093318
- Related
-
ENST00000491442.5
-
NR_038261.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks all but the first exon, and contains an alternate 5' and two alternate 3' exons, compared to variant 1. This variant is represented as non-coding because it lacks the coding region, including the translational start codon, found in variant 1.
- Source sequence(s)
-
AL158216, BC046120, BG213993
- Related
-
ENST00000489103.5