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zbtb21 zinc finger and BTB domain containing 21 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103042951, updated on 6-Jun-2024

Summary

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Gene symbol
zbtb21
Gene description
zinc finger and BTB domain containing 21
See related
EnsemblRapid:ENSAMXG00025033071
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 20
Exon count:
3
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 20 NC_064427.1 (11481734..11490245)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 20 NC_035916.1 (14248668..14257220, complement)

Chromosome 20 - NC_064427.1Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein 6a Neighboring gene uromodulin-like 1 Neighboring gene autophagy related 101 Neighboring gene uncharacterized LOC125784914 Neighboring gene RAD51 paralog C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 21

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064427.1 Reference AstMex3_surface

    Range
    11481734..11490245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022681104.2 → XP_022536825.2  zinc finger and BTB domain-containing protein 21 isoform X1

    UniProtKB/TrEMBL
    A0A8T2KZW1

  2. XM_022681105.2 → XP_022536826.2  zinc finger and BTB domain-containing protein 21 isoform X2

    UniProtKB/TrEMBL
    A0A8B9K0P2
    Related
    ENSAMXP00025055029.1, ENSAMXT00025070408.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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