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cep170aa centrosomal protein 170Aa [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103025411, updated on 6-Jun-2024

Summary

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Gene symbol
cep170aa
Gene description
centrosomal protein 170Aa
See related
EnsemblRapid:ENSAMXG00025033271
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
cep170
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 7
Exon count:
21
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 7 NC_064414.1 (22497526..22583710, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 25 NC_035921.1 (27094098..27181917)

Chromosome 7 - NC_064414.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family G (WHITE), member 5 Neighboring gene dynein, cytoplasmic 2, light intermediate chain 1 Neighboring gene uncharacterized LOC111196016 Neighboring gene SHH signaling and ciliogenesis regulator sdccag8 Neighboring gene v-akt murine thymoma viral oncogene homolog 3a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 170 kDa
Names
centrosomal protein 170

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064414.1 Reference AstMex3_surface

    Range
    22497526..22583710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049481361.1 → XP_049337318.1  centrosomal protein of 170 kDa isoform X7

    UniProtKB/TrEMBL
    A0A3B1IZB7

  2. XM_049481357.1 → XP_049337314.1  centrosomal protein of 170 kDa isoform X3

    UniProtKB/TrEMBL
    A0A3B1IGT8
    Related
    ENSAMXP00025055714.1, ENSAMXT00025071093.1

  3. XM_049481356.1 → XP_049337313.1  centrosomal protein of 170 kDa isoform X2

    UniProtKB/TrEMBL
    A0A3B1IGT8

  4. XM_049481355.1 → XP_049337312.1  centrosomal protein of 170 kDa isoform X1

    UniProtKB/TrEMBL
    A0A3B1IGT8

  5. XM_049481358.1 → XP_049337315.1  centrosomal protein of 170 kDa isoform X4

    UniProtKB/TrEMBL
    W5K6F2

  6. XM_049481360.1 → XP_049337317.1  centrosomal protein of 170 kDa isoform X6

    UniProtKB/TrEMBL
    W5K6F2

  7. XM_049481359.1 → XP_049337316.1  centrosomal protein of 170 kDa isoform X5

    UniProtKB/TrEMBL
    W5K6F2
    Related
    ENSAMXP00025055718.1, ENSAMXT00025071097.1
Nucleotide Protein
Heading Accession and Version

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