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dnajc18 DnaJ (Hsp40) homolog, subfamily C, member 18 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103024998, updated on 11-Mar-2024

Summary

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Gene symbol
dnajc18
Gene description
DnaJ (Hsp40) homolog, subfamily C, member 18
See related
EnsemblRapid:ENSAMXG00025037923
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 17 NC_064424.1 (11065019..11073472, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 14 NC_035910.1 (6986688..6994140, complement)

Chromosome 17 - NC_064424.1Genomic Context describing neighboring genes Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene bromodomain containing 8a Neighboring gene endothelial cell surface expressed chemotaxis and apoptosis regulator Neighboring gene protein phosphatase 3, catalytic subunit, alpha isozyme

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to misfolded protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chaperone cofactor-dependent protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 18
Names
DnaJ heat shock protein family (Hsp40) member C18

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064424.1 Reference AstMex3_surface

    Range
    11065019..11073472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007254096.4 → XP_007254158.1  dnaJ homolog subfamily C member 18

    UniProtKB/TrEMBL
    A0A3B1JEJ4, A0A8B9JZF3, A0A8B9K209
    Related
    ENSAMXP00025065214.1, ENSAMXT00025083008.1
    Conserved Domains (3) summary
    PTZ00341
    Location:50 → 193
    PTZ00341; Ring-infected erythrocyte surface antigen; Provisional
    TIGR02349
    Location:126 → 240
    DnaJ_bact; chaperone protein DnaJ
    pfam09320
    Location:304 → 404
    DUF1977; Domain of unknown function (DUF1977)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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