U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TPM1 tropomyosin 1 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103017195, updated on 11-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TPM1
Gene description
tropomyosin 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 3 NC_080066.1 (74173948..74201739, complement)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006725354.1 (32168788..32197350)

Chromosome 3 - NC_080066.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103017867 Neighboring gene uncharacterized LOC130707485 Neighboring gene uncharacterized LOC130707679 Neighboring gene talin 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tropomyosin alpha-1 chain
Names
tropomyosin 1 (alpha)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080066.1 Reference mBalAcu1.1

    Range
    74173948..74201739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057542068.1 → XP_057398051.1  tropomyosin alpha-1 chain isoform X9

  2. XM_057542064.1 → XP_057398047.1  tropomyosin alpha-1 chain isoform X4

  3. XM_057542065.1 → XP_057398048.1  tropomyosin alpha-1 chain isoform X6

  4. XM_057542062.1 → XP_057398045.1  tropomyosin alpha-1 chain isoform X2

  5. XM_057542066.1 → XP_057398049.1  tropomyosin alpha-1 chain isoform X8

  6. XM_057542069.1 → XP_057398052.1  tropomyosin alpha-1 chain isoform X10

  7. XM_057542063.1 → XP_057398046.1  tropomyosin alpha-1 chain isoform X3

  8. XM_007165969.3 → XP_007166031.2  tropomyosin alpha-1 chain isoform X5

    UniProtKB/TrEMBL
    A0A383YTC7
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 282
    Tropomyosin

  9. XM_057542061.1 → XP_057398044.1  tropomyosin alpha-1 chain isoform X1

  10. XM_057542074.1 → XP_057398057.1  tropomyosin alpha-1 chain isoform X16

  11. XM_057542073.1 → XP_057398056.1  tropomyosin alpha-1 chain isoform X15

  12. XM_057542072.1 → XP_057398055.1  tropomyosin alpha-1 chain isoform X14

  13. XM_028166580.2 → XP_028022381.1  tropomyosin alpha-1 chain isoform X13

    UniProtKB/TrEMBL
    A0A452CH97
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 259
    Tropomyosin

  14. XM_007165967.3 → XP_007166029.2  tropomyosin alpha-1 chain isoform X7

    UniProtKB/TrEMBL
    A0A383YTI4
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 282
    Tropomyosin

  15. XM_057542070.1 → XP_057398053.1  tropomyosin alpha-1 chain isoform X11

  16. XM_057542071.1 → XP_057398054.1  tropomyosin alpha-1 chain isoform X12

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.