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SOCS4 suppressor of cytokine signaling 4 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103014060, updated on 11-Mar-2024

Summary

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Gene symbol
SOCS4
Gene description
suppressor of cytokine signaling 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See SOCS4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 3 NC_080066.1 (135143462..135162233)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006732012.1 (8916606..8935628)

Chromosome 3 - NC_080066.1Genomic Context describing neighboring genes Neighboring gene GTP cyclohydrolase 1 Neighboring gene WD repeat and HMG-box DNA binding protein 1 Neighboring gene mitogen-activated protein kinase 1 interacting protein 1 like Neighboring gene 60S ribosomal protein L23a-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
suppressor of cytokine signaling 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080066.1 Reference mBalAcu1.1

    Range
    135143462..135162233
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007192889.2 → XP_007192951.1  suppressor of cytokine signaling 4

    UniProtKB/TrEMBL
    A0A384AZT1
    Conserved Domains (3) summary
    cd10385
    Location:275 → 375
    SH2_SOCS4; Src homology 2 (SH2) domain found in suppressor of cytokine signaling (SOCS) proteins
    cd03738
    Location:384 → 439
    SOCS_SOCS4; SOCS (suppressors of cytokine signaling) box of SOCS4-like proteins. Together with CIS1, the CIS/SOCS family of proteins is characterized by the presence of a C-terminal SOCS box and a central SH2 domain. The general function of the SOCS box is the ...
    pfam12610
    Location:59 → 111
    SOCS; Suppressor of cytokine signalling
Nucleotide Protein
Heading Accession and Version

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