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DBP D-box binding PAR bZIP transcription factor [ Physeter catodon (sperm whale) ]

Gene ID: 102994247, updated on 10-Mar-2024

Summary

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Gene symbol
DBP
Gene description
D-box binding PAR bZIP transcription factor
See related
Ensembl:ENSPCTG00005016589
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See DBP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) Unplaced Scaffold NW_021145602.1 (38189..44323)
102 previous assembly ASM283717v2 (GCF_002837175.2) Unplaced Scaffold NW_021145602.1 (38195..44323)

NW_021145602.1Genomic Context describing neighboring genes Neighboring gene netrin 5 Neighboring gene carbonic anhydrase 11 Neighboring gene sphingosine kinase 2 Neighboring gene ribosomal protein L18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
D site-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NW_021145602.1 Reference ASM283717v5 Primary Assembly

    Range
    38189..44323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055082857.1 → XP_054938832.1  D site-binding protein isoform X2

    UniProtKB/TrEMBL
    A0A9W2WI38

  2. XM_007112372.4 → XP_007112434.1  D site-binding protein isoform X1

    See identical proteins and their annotated locations for XP_007112434.1

    UniProtKB/TrEMBL
    A0A2Y9F164
    Related
    ENSPCTP00005023230.1, ENSPCTT00005025585.1
    Conserved Domains (1) summary
    cd14695
    Location:254 → 313
    bZIP_HLF; Basic leucine zipper (bZIP) domain of Hepatic leukemia factor (HLF) and similar proteins: a DNA-binding and dimerization domain
Nucleotide Protein
Heading Accession and Version

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