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RNFT2 ring finger protein, transmembrane 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102993867, updated on 10-Mar-2024

Summary

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Gene symbol
RNFT2
Gene description
ring finger protein, transmembrane 2
See related
Ensembl:ENSPCTG00005015785
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 19 NC_041232.1 (14240507..14320156)
102 previous assembly ASM283717v2 (GCF_002837175.2) 19 NC_041232.1 (14240499..14313127)

Chromosome 19 - NC_041232.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene SREBF pathway regulator in golgi 1 Neighboring gene uncharacterized LOC114484376 Neighboring gene U6 spliceosomal RNA Neighboring gene harakiri, BCL2 interacting protein Neighboring gene F-box and WD repeat domain containing 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger and transmembrane domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041232.1 Reference ASM283717v5 Primary Assembly

    Range
    14240507..14320156
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028480240.2 → XP_028336041.1  RING finger and transmembrane domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A455AW11
    Conserved Domains (1) summary
    cl17238
    Location:374 → 392
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  2. XM_055080487.1 → XP_054936462.1  RING finger and transmembrane domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A455AW11

  3. XM_007128417.4 → XP_007128479.1  RING finger and transmembrane domain-containing protein 2 isoform X6

    See identical proteins and their annotated locations for XP_007128479.1

    UniProtKB/TrEMBL
    A0A2Y9FQ78
    Related
    ENSPCTP00005022069.1, ENSPCTT00005024314.1
    Conserved Domains (1) summary
    cd16742
    Location:374 → 414
    RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

  4. XM_055080486.1 → XP_054936461.1  RING finger and transmembrane domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A9W2WB36

  5. XM_028480241.2 → XP_028336042.1  RING finger and transmembrane domain-containing protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A455AI58
    Conserved Domains (1) summary
    cl17238
    Location:374 → 392
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  6. XM_028480242.2 → XP_028336043.1  RING finger and transmembrane domain-containing protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A455AJM0
    Conserved Domains (1) summary
    cl17238
    Location:374 → 392
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain

  7. XM_028480243.2 → XP_028336044.1  RING finger and transmembrane domain-containing protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A455AJS5
    Conserved Domains (1) summary
    cl17238
    Location:374 → 395
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
Heading Accession and Version

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