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ENDOD1 endonuclease domain containing 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102989589, updated on 10-Mar-2024

Summary

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Gene symbol
ENDOD1
Gene description
endonuclease domain containing 1
See related
Ensembl:ENSPCTG00005011905
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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See ENDOD1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 16 NC_041229.1 (38557841..38594556)
102 previous assembly ASM283717v2 (GCF_002837175.2) 16 NC_041229.1 (38557848..38594549)

Chromosome 16 - NC_041229.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 4D-like Neighboring gene 60S ribosomal protein L18a-like Neighboring gene lysine-specific demethylase 4D-like Neighboring gene lysine-specific demethylase 4D-like Neighboring gene uncharacterized LOC112062715

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041229.1 Reference ASM283717v5 Primary Assembly

    Range
    38557841..38594556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007116825.4 → XP_007116887.2  endonuclease domain-containing 1 protein

    UniProtKB/TrEMBL
    A0A2Y9F7V8
    Related
    ENSPCTP00005016711.1, ENSPCTT00005018433.1
    Conserved Domains (1) summary
    cl00089
    Location:65 → 281
    NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.

RNA

  1. XR_008619575.1 RNA Sequence

  2. XR_448371.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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