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FETUB fetuin B [ Physeter catodon (sperm whale) ]

Gene ID: 102988445, updated on 10-Mar-2024

Summary

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Gene symbol
FETUB
Gene description
fetuin B
See related
Ensembl:ENSPCTG00005010310
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current ASM283717v5 (GCF_002837175.3) 1 NC_041214.2 (79320686..79338984)
102 previous assembly ASM283717v2 (GCF_002837175.2) 1 NC_041214.1 (79320686..79338984)

Chromosome 1 - NC_041214.2Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member B11 Neighboring gene alpha 2-HS glycoprotein Neighboring gene kininogen 1 Neighboring gene putative uncharacterized protein MSANTD5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in binding of sperm to zona pellucida IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fetuin-B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002837175.3-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v5 Primary Assembly

Genomic

  1. NC_041214.2 Reference ASM283717v5 Primary Assembly

    Range
    79320686..79338984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024124444.2 → XP_023980212.1  fetuin-B isoform X3

    UniProtKB/TrEMBL
    A0A2Y9SRZ0
    Conserved Domains (1) summary
    smart00043
    Location:86 → 190
    CY; Cystatin-like domain

  2. XM_007116279.3 → XP_007116341.1  fetuin-B isoform X1

    UniProtKB/TrEMBL
    A0A2Y9F7I5
    Related
    ENSPCTP00005014480.1, ENSPCTT00005016016.1
    Conserved Domains (2) summary
    smart00043
    Location:151 → 255
    CY; Cystatin-like domain
    cl09238
    Location:34 → 123
    CY; Cystatin-like domain; Cystatins are a family of cysteine protease inhibitors that occur mainly as single domain proteins. However some extracellular proteins such as kininogen, His-rich glycoprotein and fetuin also contain these domains.

  3. XM_024124443.2 → XP_023980211.1  fetuin-B isoform X2

    UniProtKB/TrEMBL
    A0A2Y9SNI9
    Conserved Domains (1) summary
    smart00043
    Location:114 → 218
    CY; Cystatin-like domain
Nucleotide Protein
Heading Accession and Version

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